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Published January 11, 2023 | Version 1
Workflow Open

Code for comparison of Caco-2 cell transcriptomes

  • 1. Laboratory of Microbiology, Wageningen University & Research, Wageningen, The Netherlands
  • 2. Division of Toxicology, Wageningen University & Research, Wageningen, The Netherlands
  • 3. Division of Human Nutrition and Health, Wageningen University & Research, Wageningen, The Netherlands

Description

This ZIP-archive contains six files, including R-code, required to analyze array data from the Gene Expression Omnibus. This workflow was used for the paper:
Title: Systematic comparison of transcriptomes of Caco-2 cells cultured under different cellular and physiological conditions.
Authors: Janneke Elzinga, Menno Grouls, Guido Hooiveld et al.
Published in: Archives of Toxicology (2023), DOI: 10.1007/s00204-022-03430-y

 

Files

Elzinga_etal_workflow.zip

Files (16.0 MB)

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md5:0ea0a4a4ed92229cfdabf5a5b8e9a771
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Additional details

Related works

Is supplemented by
Journal article: 10.1007/s00204-022-03430-y (DOI)