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Series GSE76907 Query DataSets for GSE76907
Status Public on Aug 24, 2016
Title Dormant and after-ripened seeds are distinguished by early transcriptional differences in the imbibed state
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary We analyzed the transcriptome of dormant and after-ripened imbibed seeds of the Arabidopsis accession Cape verde Islands.
We analyzed the transcriptional changes in temporal and spatial detail by sampling at four imbibition time-points (3, 7, 12 and 24 hours after sowing) and two seed compartments (RAD and MCE).
 
Overall design Gene expression in imbibed dormant and after-ripened seeds was compared. For each sample three replicates were used.
 
Contributor(s) Dekkers BJ, Pearce SP, van Bolderen-Veldkamp M, Holdsworth MJ, Bentsink L
Citation(s) 27625677
Submission date Jan 15, 2016
Last update date Aug 18, 2017
Contact name Leónie Bentsink
E-mail(s) leonie.bentsink@wur.nl
Phone +31317481325
Organization name Wageningen University
Street address Droevendaalsesteeg 1
City Wageningen
ZIP/Postal code 6708 PB
Country Netherlands
 
Platforms (1)
GPL21063 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array [Custom CDF: (Ath1121501_At_TAIRG.cdf v18.0.0]
Samples (54)
GSM2040468 CVI, D dry seeds (FR_DRY.1)
GSM2040469 CVI, D dry seeds (FR_DRY.2)
GSM2040470 CVI, D dry seeds (FR_DRY.3)
Relations
BioProject PRJNA308922

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE76907_RAW.tar 107.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
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